2. Assemblies of Rhodobacter sphaeroides (genome size 4,603,060). Columns are the same as in the previous Table.
|
Assembler |
Contigs |
Scaffolds |
||||||
|
Num |
N50 (kb) |
Errors |
N50 corr. (kb) |
Num |
N50 (kb) |
Errors |
N50 corr. (kb) |
|
|
ABySS |
1915 |
5.9 |
76 |
4.2 |
1701 |
9 |
3 |
5 |
|
Allpaths-LG |
204 |
42.5 |
49 |
34.4 |
34 |
3,192 |
0 |
3,192 |
|
Bambus2 |
177 |
93.2 |
373 |
12.8 |
92 |
2,439 |
2 |
2,419 |
|
CABOG |
322 |
20.2 |
44 |
17.9 |
130 |
66 |
5 |
55 |
|
MSR-CA |
395 |
22.1 |
52 |
19.1 |
43 |
2,976 |
5 |
2,966 |
|
SGA |
3067 |
4.5 |
12 |
2.9 |
2096 |
51 |
0 |
51 |
|
SOAPdenovo |
204 |
131.7 |
422 |
14.3 |
166 |
660 |
0 |
660 |
|
Velvet |
583 |
15.7 |
43 |
14.5 |
178 |
353 |
19 |
270 |